shinyGEO

shinyGEO is a web-based tool that allows a user to download the expression and sample data from a Gene Expression Omnibus dataset, select a gene of interest, and perform a survival or differential expression analysis using the available data. For both analyses, shinyGEO produces publication-ready graphics and generates R code ensuring that all analyses are reproducible.

Author: Jasmine Dumas

App: http://bioinformatics.easternct.edu/shinyGEO/

Code: https://github.com/jasdumas/shinyGEO

Documentation: http://jasdumas.github.io/shinyGEO/

shinyGEO

Suggestions, questions, or reviews for this app? Comments are open!

If any of the info above is incorrect or needs to be updated, please send an email to corrections (at) showmeshiny.com and reference this post's URL.

Add a comment